We have a new preprint and GitHub page up describing OT-Mation, a script to move experimental arrays generated using statistical Design of Experiments (#DoE) directly in to code to control the OpenTrons OT-2 liquid handling robotics platform. This reduces programming time for the OT-2 and helps prevent inclusion of incorrect experimental combinations in the script.
preprint on biorxiv:
https://www.biorxiv.org/content/10.1101/2025.01.20.633898v1
#PlasmoTron: An #OpenSource software platform for #automated #culture of #malaria #parasites:
-utilizes an #OpenTrons #robot under #RaspberryPi control
https://doi.org/10.1101/241596
#DIYbio #lab #instruments #NTDs
An #OpenSource modular framework for high-throughput #automated #pipetting and #imaging applications:
-combining the tools #OpenFlexure, #Opentrons, #ImJoy & #UC2
https://doi.org/10.1002/adbi.202101063
#DIYbio #lab #instruments #education #MINT #STEM #microscopy
RT @st_michalik: If you are attending the HUPO2023 I would be happy to see you at my talk regarding MassSpecPreppy. If you have an OT-2 and want to try MassSpecPreppy I will bring one set of 3D printed parts with me.
https://www.authorea.com/doi/full/10.22541/au.169148377.71225055/v1
#HUPO #Opentrons #MS #sample_preparation #SP3 https://www.authorea.com/doi/full/10.22541/au.169148377.71225055/v1
If you want to know more about an easy to use automatic protein concentration determination and sample preparation for mass spectrometry… here is our new preprint - MassSpecPreppy uses the OT-2 from opentrons #OT2 #Opentrons #MS #automation #SP3 #BCA https://www.authorea.com/users/650415/articles/658922-massspecpreppy-an-end-to-end-solution-for-automated-protein-concentration-determination-and-flexible-sample-digestion-for-proteomics-applications
Hmm, what is the option to control the pre-wet behaviour of the OpenTrons pipettes in the python interface? According to the OpenTrons API documentation there seems to be no option to pre-wet like in the Protocol Designer?! AirGap, Blowout etc. are all also available in the Python interface... #OpenTrons
Looking for #biofoundry and #automation and #syntheticbiology folks. Building a bio foundry with high throughput liquid handlers #robots #clia #sequencing and looking for others #opentrons #hamilton
