#mpievolbio

2025-01-17

Linking metadata in electronic lab notebook #OpenBIS with metadata in the
#bioimage resource #Omero: How many images are present in omero for a given sample in OpenBIS?
At #mpievolbio, to answer this and similar questions,
we map both resources to #RDF #KnowledgeGraphs using the #ontop framework,
serve the materialized #KGs via #qLever (qlever.cs.uni-freiburg.de) and run a #SPARQL query. Answered in no time! @nfdi4bioimage #LinkedOpenData #FAIR #MicrobialPopulationBiology @ontop

sparql query and response against a knowledge graph for microbial population biology
2024-03-27

...and here we are happily hacking away. #python #hackathon #thecarpentries #mpievolbio

2024-03-27

It's day 4 of our #softwarecarpentry workshop at #mpievolbio and we'll put together everything we learned about using the Unix shell, #git and #python in a mini #hackathon

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