A beautiful wooden model of pancreatic trypsin inhibitor (5PTI, Wlodawer et al, 1984).
Some kinda structural bioinformatician & software making person.
"nobot"
A beautiful wooden model of pancreatic trypsin inhibitor (5PTI, Wlodawer et al, 1984).
“I went back to warn them, but they already knew and didn’t seem to care.” https://www.newyorker.com/cartoons/daily-cartoon/thursday-january-27th-time-machine ht @W_Lucht @martinanota
So here are all the Alphafold2 forks/reimplementations/related-ideas that I'm aware of and still catching up on:
ColabFold: https://github.com/sokrypton/ColabFold
OpenFold: https://github.com/aqlaboratory/openfold
ESMFold: https://github.com/facebookresearch/esm
FastFold: https://github.com/hpcaitech/FastFold
OmegaFold: https://github.com/HeliXonProtein/OmegaFold
RoseTTAFold: https://github.com/RosettaCommons/RoseTTAFold
Have I missed any notable or interesting ones ?
At the latest ARDC techtalk by @Sbollmann_MRI and Audrey Stott - "Containers for Scientific Software Distribution Service including security scanning and CVMFS"
Great proposal for providing a community-lead container build and distribution infrastructure for HPC in Australia.
Slides at: https://sites.google.com/ardc.edu.au/techtalk2020/talks (video later)