Want to learn how to process 16S microbiome data, conduct analyses, & visualize results?
Want to learn community-scale metabolic modeling?
Want to hear talks from experts on the gut-brain axis?
Register for the 2024 ISB Virtual Microbiome Series!
microbiome science | assoc prof @ Inst. for Systems Bio (ISB) | affiliate faculty at Univ. of Washington BioE and Genome Sciences | eScience Inst. and Applied Micro. Int. fellow | WRF investigator | systems bio of 💩 🦠 | 🧫🧬💻⚕️ | 🏳️🌈 he/him
Want to learn how to process 16S microbiome data, conduct analyses, & visualize results?
Want to learn community-scale metabolic modeling?
Want to hear talks from experts on the gut-brain axis?
Register for the 2024 ISB Virtual Microbiome Series!
Excited to share that Nick Quinn-Bohmann's recent paper is the July cover-article in Nature Microbiology!
Check it out our paper here: https://www.nature.com/articles/s41564-024-01728-4
Cover art (attached) by the amazing Sam D'Orazio, in consultation with Allison Kudla at ISB 🤩
This work was co-supervised by @thaasophobia, & we had help from an amazing team of collaborators.
Happy to announce that my last preprint from the Gibbons Lab at ISB is now out at https://www.biorxiv.org/content/10.1101/2024.02.02.578701v1 . In the end it took us almost 5 years to make this work well.
Dietary intake is major factor in many studies but is not easy to measure on a fine-grained level. Our idea was to use metagenomic shotgun sequencing of fecal samples to detect and quantify food-derived DNA.
🐈 ← 💼 Some personal news: Early 2024 I will be joining the faculty of the @medunigraz. It's definitely a bitter-sweet moment leaving the amazing @gibbological lab at ISB, but I am very excited for what comes next and can't wait to work with the great research community in Graz (and Europe). https://www.cdiener.com/posts/meduni-graz/
Check out the latest paper from our lab: "Growth phase estimation for abundant bacterial populations sampled longitudinally from human stool metagenomes" in Nature Communications https://www.nature.com/articles/s41467-023-41424-1
@MicrobioJC purple rain, purple rain
I'm excited to announce that the 2023 ISB Virtual Microbiome Series registration site is live!
We will host a 2-day bioinformatic course and a 1-day symposium Oct. 11-13.
This year's theme is 'how the ecology of our guts protects us from pathogens'
I'm excited to announce that the 2023 ISB Virtual Microbiome Series registration site is live!
We will host a 2-day bioinformatic course and a 1-day symposium Oct. 11-13.
This year's theme is 'how the ecology of our guts protects us from pathogens'
Island biogeography theory and the gut: why taller people tend to harbor more diverse gut microbiomes. https://www.biorxiv.org/content/10.1101/2023.08.08.552554v1?med=mas
Out online now: Spotlight on 'A changing gut virome ecological landscape with longevity'
@TWilmanski @gibbological
Special collection of immunology articles from JEM. Happy to see our paper highlighted!
https://t.co/m66ZTYreA9 https://rupress.org/DocumentLibrary/CollectionPDFs/Immunology_Collection_2023_Magazine_WEB.pdf
RT @Alice_E_Kane
I will be talking about frailty and epigenetic clocks in 🐭 at this virtual NIA workshop on heterogeneity in aging - my favorite topic! Mon/Tues 5/8-9, registration is free! https://twitter.com/NIHAging/status/1651934508835381260
RT @alexhbnr
In our study published today in @ScienceMagazine, we provide a proof of concept for the potential use of ancient microbes as a source for developing new drugs by synthesising previously unknown metabolites from reconstructed gene clusters. http://www.science.org/doi/10.1126/science.adf5300
Proud to announce that @joemyxter and I took the @isbsci cornhole championship trophy home again this year 🌽🏆 🫅
And @BioBohmann brought home the best poster award 🥇
Be it science or sport, we came home from Leavenworth laden with victory 💥
RT @rossbenjamind
*Very* excited to share our latest paper in which we use metagenomics to understand how microbiome development during early life is altered in infants with cystic fibrosis. Led by @pesalerno and @ajverster https://www.biorxiv.org/content/10.1101/2023.05.02.539134v1 @MCBDartmouth @m2p2_dartmouth @DartCF
A fine day for the @isbsci annual retreat 🏔️🌞
Photo credit @avcarrology
RT @drsueishaq
That's a wrap on the 2023 @MicroSocEquity speaker series! Thanks to our speakers, attendees, organizers, and support by @UMaine_Medicine and CADLS.
Catch up on the entire 2023 series, as we have updated the event page with links to the recordings:
https://sueishaqlab.org/microbes-and-social-equity-working-group/mse-speaker-series-spring-2023/
RT @cellhostmicrobe
Fuso induces tumor resistance to #immunotherapy. New work reports that Fusobacterium nucleatum-derived succinic acid diminishes sensitivity to anti-PD-1 mAb in #ColorectalCancer by impairing CD8+ #Tcell-mediated antitumor immunity https://www.cell.com/cell-host-microbe/fulltext/S1931-3128(23)00161-0
RT @gilbertjacka
Trust Your Gut: Is the Microbiome the New Disruptor in Healthcare and Disease Treatment? https://milkeninstitute.org/panel/14347/trust-your-gut-microbiome-new-disruptor-healthcare-and-disease-treatment