Lmst
Login

#AlphaFoldMultimer

MCDuncanLabMCDuncanLab@mstdn.social
2023-09-14

Note in point.

What does it mean when only your rank 1 model suggests an interaction between two proteins with alphafold multimer? Is this garbage?

#AlphaFoldMultimer
#AlphaFold
#AlphaFold2
#ProteinPrediction
#StructurePredictions
#ProteinPredictionHelp

Some PAE plots which show predicted aligned error produced by AlphaFold-Multimer. The first plot shows lots of blue in all 4 quadrants, the rest show only blue in the top left and bottom right, suggesting the predicted between subunits is not good.

Client Info

Server: https://mastodon.social
Version: 2025.04
Repository: https://github.com/cyevgeniy/lmst