#MixedModel

Nikos Tsardakas Renhuldtnikostr@scholar.social
2024-04-13

I have #genomic variants called using #FreeBayes. I want to identify sex-linked regions of the genome. As a complement to visualization I’m considering doing some type of #statistical analysis, in part driven by wanting to learn more #stats. I’m less interested in allele differences (GWAS) and more in #heterozygosity, coverage depth, etc. Are there standard models to identify region differences? Could a #MixedModel be used for this?

2023-10-27

Hey #mixedmodel #rstats peeps - anyone know of a package or function that does for #glmmTMB what merTools::predictInterval() does for #lme4? #wantingToMoveEverythingOver

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