Lmst

Want a sneak peek or to try it on your own data? Try EnrichMap https://enrichmap.readthedocs.io/en/latest/
#SpatialTranscriptomics #ComputationalBiology #EnrichMap #spatialomics

🚀 We’re wrapping up our 3-day Spatial Omics in R/
@bioconductor workshop!

A huge THANK YOU to Stefano,Malvika and all our attendees who made this event a success 🎉

Until next time — https://www.physalia-courses.org/courses-workshops/ 🧬🗺️
#SpatialOmics #Bioconductor #RStats #itdyomics

🚀 Just kicked off our Spatial Omics in R/Bioconductor course with Stefano Mangiola

In this 3-day course, we're gonna explore spatial technologies & hands-on data analysis in R and @bioconductor using tidy principles🧬🧠📊
https://www.physalia-courses.org/courses-workshops/spatial-omics-1/
#SpatialOmics #RStats #Bioconductor

📣 Listen up: you only have a few more days to apply for #EMBOSpatialOmics!

Would you like to get a comprehensive introduction to the various methods of spatial-omics and in particular those of multiplex immunofluorescence and spatial transcriptomics?

Then apply for this hands-on EMBO Practical Course by 10 March ✍️

🌍 EMBL Heidelberg
📅 15 – 20 June 2025
💻 https://s.embl.org/iso25-01-ma

#spatialtranscriptomics #microscopy #imageanalysis #spatialbiology #spatialomics

How merging several advanced techniques will enable Generative Digital Twins. #digitalTwins #generativeAI #spatialOmics #imaging https://www.csbj.org/article/S2001-0370%2824%2900319-2/fulltext

Do you want to deepen your knowledge of spatial-omics methods? Then check out #EMBOSpatialOmics! 🔬

With hands-on practicals, this course will teach you how to carry out open-source imaging-based methods for cost-effective spatial transcriptomics and multiplex immunofluorescence.

📥 Application deadline: 10 March 2025
🌍 EMBL Heidelberg
📅 15 – 20 June 2025
💻 https://s.embl.org/iso25-01-ma

#microscopy #imageanalysis #spatialomics

Postdoc in dynamic causal gene network from single-cell & spatial multiomic

University of Massachusetts Chan Medical School

We seek #postdoc to decode dynamic #GeneRegulatoryNetwork from #SingleCell & #SpatialOmics with #CausalInference. Quantitative bg needed. Apply now!????

See the full job description on jobRxiv: https://...
https://jobrxiv.org/job/university-of-massachusetts-chan-medical-school-27778-postdoc-in-dynamic-causal-gene-network-from-single-cell-spatial-multiomic/?feed_id=84784

Postdoc in dynamic causal gene network from single-cell & spatial multiomic

University of Massachusetts Chan Medical School

We seek #postdoc to decode dynamic #GeneRegulatoryNetwork from #SingleCell & #SpatialOmics with #CausalInference. Quantitative bg needed. Apply now!????

See the full job description on jobRxiv: https://...
https://jobrxiv.org/job/university-of-massachusetts-chan-medical-school-27778-postdoc-in-dynamic-causal-gene-network-from-single-cell-spatial-multiomic/?feed_id=83054

Latest addition to our #SpatialOmics Methods series tackles the challenge of integrating multiple spatially resolved transcriptomics datasets. That employs the expression of all measured genes and the spatial location of cells, to integrate multiple tissue sections.

spatiAlign: an unsupervised contrastive learning model for data integration of spatially resolved transcriptomics https://doi.org/10.1093/gigascience/giae042

See the series here: https://academic.oup.com/gigascience/pages/spatial-omics-methods-and-applications

Postdoc in dynamic causal gene network from single-cell & spatial multiomic

University of Massachusetts Chan Medical School

We seek #postdoc to decode dynamic #GeneRegulatoryNetwork from #SingleCell & #SpatialOmics with #CausalInference. Quantitative bg needed. Apply now!????

See the full job description on jobRxiv: https://...
https://jobrxiv.org/job/university-of-massachusetts-chan-medical-school-27778-postdoc-in-dynamic-causal-gene-network-from-single-cell-spatial-multiomic/?feed_id=78140

Our second parallel session is about to start at #SIBdays24: “#SingleCell Biology: #Biology Through the Lens of Single-Cell and #SpatialOmics Technologies” chaired by Aurélie Gabriel @fondationisrec et @markrobinsonca https://sibdays.sib.swiss/session-descriptions#Single-cell …

Postdoc in dynamic causal gene network from single-cell & spatial multiomic

University of Massachusetts Chan Medical School

We seek #postdoc to decode dynamic #GeneRegulatoryNetwork from #SingleCell & #SpatialOmics with #CausalInference. Quantitative bg needed. Apply now!????

See the full job description on jobRxiv: https://...
https://jobrxiv.org/job/university-of-massachusetts-chan-medical-school-27778-postdoc-in-dynamic-causal-gene-network-from-single-cell-spatial-multiomic/?feed_id=76684

Postdoc in dynamic causal gene network from single-cell & spatial multiomic

University of Massachusetts Chan Medical School

We seek #postdoc to decode dynamic #GeneRegulatoryNetwork from #SingleCell & #SpatialOmics with #CausalInference. Quantitative bg needed. Apply now!????

See the full job description on jobRxiv: https://...
https://jobrxiv.org/job/university-of-massachusetts-chan-medical-school-27778-postdoc-in-dynamic-causal-gene-network-from-single-cell-spatial-multiomic/?feed_id=76376

“CellCharter is a remarkable tool to identify, characterize and compare cell communities in spatial -omics datasets.”

🥁 One of the #SIBRemarkableOutputs 2023 👏

👉 Find out more about this and the other outputs: https://tinyurl.com/4v66b235
#CellPlasticity #SpatialOmics

🚀We've just kicked off the #SpatialOmics in R/ @bioconductor course!
🌍Excited to see researchers from all over the globe joining us for this journey into cutting-edge spatial omics analysis
Let's make this an incredible learning experience!