Lmst

Postdoctoral Research Scientist

Earlham Institute

Applications are invited for a Postdoctoral Research Scientist to join the Research Faculty Department at the Earlham Institute, based in Norwich, UK.

See the full job description on jobRxiv: https://jobrxiv.org/job/earlham-institute-27778-postdoctoral-research-scientist-7/?feed_id=94968

#bioinformatics #computational_biology #computational_ge...
https://jobrxiv.org/job/earlham-institute-27778-postdoctoral-research-scientist-7/?feed_id=94968

Interesting slides of the development of a national computation environment for structural biology in Sweden

- https://www.nsc.liu.se/support/presto/PReSTO_status_report_June_2021.pdf

- https://www.nsc.liu.se/support/presto/PReSTO_InfraLife_ISB_2022.pdf

Real processing datasets and times of different hardware, as well as the heterogenous spread of applications on different clusters:
- https://www.nsc.liu.se/support/presto/PReSTO_ISB_Dec_2024_15slides.pdf

#structuralbiology #HPC #bioinformatics

🎓 Our #Python course concludes with student project presentations covering topics like genomic feature extraction, sequence analysis, and large-scale data wrangling.
👉 See the course materials on GitHub: https://github.com/bpucker/PyBo
#OpenScience #Bioinformatics #PythonProgramming
@PuckerLab

Illustration of four diverse students presenting their final Python course projects in a classroom. A projector screen behind them displays the course title 'PYTHON COURSE' with four project topics: 'Extraction of Genomic Features', 'Development of Molecular Markers from Sequence Variants', 'Analysis of Large Citation Data Sets', and 'Cleaning of FASTA Files'. Two audience members are visible from behind, listening attentively. The students are holding laptops or notes and appear confident and engaged.

Melbourne Bioinformatics is hosting a FREE workshop on Hybrid de novo genome assembly using Galaxy. Save the date: Thursday, 5 June 2025, 1:00 PM - 4:00 PM AEST at 21 Bedford Street North Melbourne, VIC 3051. #GenomeAssembly #Bioinformatics
https://www.eventbrite.com.au/e/hybrid-de-novo-genome-assembly-nanopore-and-illumina-using-galaxy-tickets-1232439251979?aff=oddtdtcreator

Quadram Early Career Fellowship

Quadram Institute Bioscience

We have an exciting opportunity for Early Career Researchers to join a fellowship scheme to help individuals become future leaders

See the full job description on jobRxiv: https://jobrxiv.org/job/quadram-institute-bioscience-27778-quadram-early-career-fellowship/?feed_id=94859

#bioinformatics #genetics #gut_microbiome #micr...
https://jobrxiv.org/job/quadram-institute-bioscience-27778-quadram-early-career-fellowship/?feed_id=94859

📣 GBCC2025 Poster Abstracts Deadline Extended

Good news! The deadline for submitting your abstract for a poster presentation at GBCC2025 has been extended to May 9th. Join us at Cold Spring Harbor, June 23–26.

We’re looking forward to seeing your work!

🔗 Submit here: https://gbcc2025.bioconductor.org/abstracts/submission_guidelines/

#GBCC2025 #Bioinformatics #DataScience

Promotional poster for GBCC2025. The text reads: 'SHOW OFF YOUR WORK! POSTER ABSTRACTS DUE MAY 1, 2025'. An additional note says 'Deadline Extended to May 9th!'. Additional details include: GBCC2025, Cold Spring Harbor, NY, June 23-26, 2025.

Question for dorado correct/herro users out there.

What's the final corrected fasta yield like on your end? I'm feeding in r10 fastq with 13 billion bases and getting back 2.4 m bases in return, not sure if this is expected. 😅

#bioinformatics

👩🏾‍🎓 The course is aimed at masters students and early-stage PhD students.
📅 Applications are open from now until to May 30st 2025 To apply, please visit our website:
https://spaam-community.org/wss-summer-school/
❓ Any Qs: contact James Fellows Yates (@jfy133) or Prof. Christina Warinner (@WarinnerGroup )

#aDNA #metagenomics #bioinformatics #paleogenomics

So what are people using to visualize gfa files these days? I've been using ctlab fork of BandageNG (https://github.com/ctlab/BandageNG) but it looks like older BandageNG is finally getting updated too (https://github.com/asl/BandageNG)

Or are there better gfa graph visualization solutions out there now?

#bioinformatics

I am testing a new feature on my course: an AI-based instructor, to support the student.

Thus, I allowing students to enroll for free to my course, there is a limited number of free coupons.

#udemy #javascript #angular #typescript #artificialintelligence #machinelearning #tensorflow #bioinformatics

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Machine learning in Angular

Learn to build machine learning algorithms for biomedical datasets using TensorFlow.js in Typescript

https://www.udemy.com/course/machine-learning-in-angular/?referralCode=B6369BE299AFADFAFFFC

Free acess: ABE5F2EB2224EC077B0B

@bitflipped
Hi, Cameron! I also enjoy C# programming, though I'm using it professionally rather than for fun. I use .NET for #bioinformatics research. My code is frequently appalling; the first versions of the software I'm writing now were crafted in Emacs but built with the .NET 4.0 command line compiler. One of my junior colleagues created some features that required that I update to the Visual Studio build system instead...

Udemy new feature release! Awesome!

Udemy now allow us instructors to build instructor bots. You can talk to an 24-7 instructor, and learn as you go!

#diabetes #bioinformatics #udemy
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Machine learning in Angular | new feature from Udemy | AI Assistant
https://www.youtube.com/watch?v=5nQJTdFU6k8

Pipeline release! nf-core/airrflow v4.3.0 - v4.3.0 - Revelio!

Please see the changelog: https://github.com/nf-core/airrflow/releases/tag/4.3.0

#airr #bcell #immcantation #immunorepertoire #repseq #nfcore #openscience #nextflow #bioinformatics

2-year Postdoc Position: Evolution and Organization of Ant Olfactory Systems

– in Carlotta Martelli's lab at Johannes Gutenberg University Mainz, Germany.

https://mrtlllab.uni-mainz.de/wp-content/uploads/2025/01/PostDoc-Position-Neuro-Ants-150125.pdf

"The ideal candidate should have a strong background in bioinformatics, ideally with practical or theoretical experience in single-cell transcriptomics or comparative genomics. A keen interest in neurobiology is essential. Additional skills in evolutionary biology, insect handling, and programming (preferably in Python) would be advantageous, but are not mandatory."

Position still open!

#ants #PhDJobs #postdocJob #neuroscience #entomology #olfaction #bioinformatics