#molecularevolution

Marc Robinson-Rechavimarcrr@ecoevo.social
2025-06-13

Exciting work led by Giulia Zancolli on the venomless Uloboridae spiders. They lost their venom glands and venom injecting duct, but wrap their prey in toxic digestive fluids.
The paper: bmcbiol.biomedcentral.com/arti
The press release (in ๐Ÿ‡ซ๐Ÿ‡ท) unil.ch/news/1749727639234 #Venom #Spiders #EvoDevo #MolecularEvolution

Marc Robinson-Rechavimarcrr@ecoevo.social
2025-06-10

Nice highlight of our recent work on the evolution of venom production in marine predatory snails
nature.com/articles/s41559-025
#EvoDevo #MolecularEvolution #Venom

Marc Robinson-Rechavimarcrr@ecoevo.social
2025-06-04

You can still apply: Postdoc job opportunity! We're looking for early career researcher in evolutionary genomics to study the relation between intra-specific gene expression variability, polymorphism, and macro-evolutionary rates. We have all of the data in 3 fishes and amphioxus, just waiting for your expertise and enthusiasm!
tinyurl.com/3aewk286
#EvoDevo #MolecularEvolution #bioinformatics #PopulationGenomics #RNAseq #PostDoc

Marc Robinson-Rechavimarcrr@ecoevo.social
2025-05-13

Postdoc job opportunity! We're looking for early career researcher in evolutionary genomics to study the relation between intra-specific gene expression variability, polymorphism, and macro-evolutionary rates. We have all of the data in 3 fishes and amphioxus, just waiting for your expertise and enthusiasm!
tinyurl.com/3aewk286
#EvoDevo #MolecularEvolution #bioinformatics #PopulationGenomics #RNAseq #PostDoc

Marc Robinson-Rechavimarcrr@ecoevo.social
2025-05-07

Nice RNAseq atlas of small but important crustacean Daphnia pulex, and study of "selection operating on genes expressed in different tissues" biorxiv.org/content/10.1101/20 #EvoDevo #MolecularEvolution #RNAseq #Daphnia #Crustacean

Marc Robinson-Rechavimarcrr@ecoevo.social
2025-04-29

Great to see this out in society journal @molbioevol @officialSMBE!
Cone snails are venomous ๐Ÿš๐Ÿฝ๏ธ๐ŸŸ and have evolved from non venomous marine snails. We show how their venom gland evolved from homologous glands, and how this affected the evolution of their digestive system.
doi.org/10.1093/molbev/msaf095 #MolecularEvolution #EvoDevo #Venom

Left: overview of the anatomy of a marine snail, with color-coded sampled tissues: salivary glands, foot, gland, oesophagus, and columellar muscle
Right: phylogeny of the marine snails used in the study, showing different gland phenotypes in different species: oesophageal gland, gland of Leiblein, no gland, and venom gland with muscular bulk
Marc Robinson-Rechavimarcrr@ecoevo.social
2025-03-17

This is the best explanation I've ever seen for lungfish genome sizes
xkcd.com/3064/
#XKCD #Genomes #MolecularEvolution #lungfish

Marc Robinson-Rechavimarcrr@ecoevo.social
2025-02-11

Ah now for something lighter: a horseshoe crab genome, whole genome duplications, and a cartoon:
doi.org/10.1093/molbev/msaf021
tapas.io/episode/3123425
#EvoDevo #MolecularEvolution #Genomics

Genetics Ecology and EvolutionGenEcoEvo@ecoevo.social
2025-02-11

Like sex chromosomes and supergenes, the non-recombining region accumulates transposable elements, nonsynonymous substitutions, and gene presence/absence polymorphismsโ€”a hallmark of recombination suppression. #MolecularEvolution
5/5

Marc Robinson-Rechavimarcrr@ecoevo.social
2025-01-15

Intriguing: modeling and empirical data support that after whole genome duplication (autotetraploids) genetic variation rises, and mutation load increases because deleterious mutations are masked by additional chromosome copies
biorxiv.org/content/10.1101/20
#WholeGenomeDuplication #paralog #MolecularEvolution #PopulationGenetics #Arabidopsis

Marc Robinson-Rechavimarcrr@ecoevo.social
2024-12-17

Nice perspective preprint following @officialSMBE symposium, led by Marina Braso Vives @dee_unil:
Unlocking the hidden dimensions of genomic diversity within species
ecoevorxiv.org/repository/view #EvolutionaryBiology #MolecularEvolution

Marc Robinson-Rechavimarcrr@ecoevo.social
2024-12-06

Very interesting preprint by @jkpritch lab on non monotonous relation between phenotype and gene expression, relevant to #MolecularEvolution and #EvoDevo (and human medicine I suppose ๐Ÿ˜‰)
medrxiv.org/content/10.1101/20

Marc Robinson-Rechavimarcrr@ecoevo.social
2024-11-14

New lab preprint! I'll write a thread about it as soon as I have time, but we show that gene expression variability between outbred fish is under organ-specific selection
biorxiv.org/content/10.1101/20
@dee_unil #EvoDevo #MolecularEvolution

photos of a gar, a pike and a zebrafish
Marc Robinson-Rechavimarcrr@ecoevo.social
2024-11-01

Very nice preprint on most-diverged vs. less-diverged ortholog among paralog pairs: biorxiv.org/content/10.1101/20 @dessimoz #ortholog #paralog #MolecularEvolution

2024-09-06

Our latest paper elifesciences.org/articles/873
directly measures the #EffectivePopulationSize that matters to #NearlyNeutralTheory / #DriftBarrier theory, as the degree to which #CodonBias differs from expectations from GC content. Surprisingly, stronger #NaturalSelection -> higher #IntrinsicStructuralDisorder proteins
#MolecularEvolution #PopulationGenetics #EvolgenPaper 1/

Marc Robinson-Rechavimarcrr@ecoevo.social
2024-08-21

Nice paper by @duret_lbbe lab on (lack of) selection of codon usage in animals ecoevo.social/@biorxiv_genomic #MolecularEvolution #Neutralism

Marc Robinson-Rechavimarcrr@ecoevo.social
2024-08-19
Marc Robinson-Rechavimarcrr@ecoevo.social
2024-06-05

Updated preprint of work by Tina Begum et al showing that paralogs from small-scale duplications have jumps in expression phenotype, much more than orthologs or whole genome duplication paralogs
biorxiv.org/content/10.1101/20 #ortholog #paralog #phylogenetics #GeneExpression #MolecularEvolution #FishEvolution

Marc Robinson-Rechavimarcrr@ecoevo.social
2024-05-31

Registrations open to our @SIB course for PhD students in Lausanne ๐Ÿ‡จ๐Ÿ‡ญ with @rmwaterhouse and @dessimoz :
Biodiversity bioinformatics: from large-scale phylogenomics to gene families and functions
with @bgeedb, OMA and BUSCO inside
sib.swiss/training/course/2024 #BiodiversityGenomics #MolecularEvolution #ortholog #paralog #bioinformatics

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