#opsin

2024-11-21

We thank our postdoc Natalie Roberts for leading a stimulating lab-meeting today on #colour #vision and #opsin genes in damselflies and other insects for members of #SvenssonLab and #TsuboiLab.

In the evening some of the lab members went to Café Ariman in Lund and later to see the movie "The Apprentice" at #Kino in #Lund

Marc Robinson-Rechavimarcrr@ecoevo.social
2023-07-26

If you too like #opsin evolution, check our new #bioinformatics tool #Matreex to visualize the evolution of complex gene families, illustrated by the evolution of vertebrate red-sensitive visual opsins biorxiv.org/content/10.1101/20 #SMBE2023

Visualisation with Matreex of the evolution of opsins, showing the species tree partially collapsed on top, the gene tree partially collapsed on right, and gene counts in the center
Marc Robinson-Rechavimarcrr@ecoevo.social
2023-07-26

Marjorie Liénard: method to express invertebrate opsin proteins in vitro, allowing to show spectral shifts in opsins in butterflies, with notably 2 paralogs of LW providing differentiation in function between the dorsal and ventral parts of the eye pnas.org/doi/abs/10.1073/pnas. #SMBE2023 #opsin #GeneDuplication #paralog

2023-07-14

Our favourite #Platynereis #opsin now in the mammalian brain as a new #optogenetic tool!

"Here we ... found that the Platynereis dumerilii ciliary opsin ... is an efficient, versatile, light-activated bistable GPCR that can suppress synaptic transmission in mammalian neurons with high temporal precision in-vivo "

biorxiv.org/content/10.1101/20

#neuroscience #GPCR

Schematic representation of an autaptic neuron recorded in the whole-cell configuration. On the right, representative EPSCs traces evoked by a pair of 1 ms
depolarizing current injections in a PdCO-expressing autaptic neuron.
Marc Robinson-Rechavimarcrr@ecoevo.social
2023-02-26

#Matreex can be used for teaching, as here with the classical example of opsin evolution: notice the parallel loss of blue- and green-sensitive opsins in snakes and mammals, the duplications in frugivorous old-world primates, and the duplications and losses in fishes according to habitat. #opsin #MolecularEvolution
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Matreex visualization of the evolution of opsins, with the partially collapsed species tree on top, and phylogenetic profiles per subfamily showing gains and losses related to life history.
2022-12-08

Hot off the press! Move over deep homology, what about ‘deep diversity’? We review the vast variation of visual system development and physiology.

mdpi.com/2073-4409/11/24/3966

#evolution #complexity #opsin #eyes

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