#microarray

Bose-Einstein-KondensatMWNautilus@mstdn.social
2025-06-19
Dept of Translational Genomicstgx_um@social.edu.nl
2025-01-22

new paper: "Text-based experiment retrieval in genomic databases" doi.org/10.1177/01655515221118

"This study is the first attempt to use text-driven semantic analysis approaches for developing a retrieval framework for experiments. An empirical study was conducted on a large textual description of Arabidopsis microarray experiments from the Gene Expression Omnibus database."

#microarray #bioinformatics

Figure 1. Overview of the proposed framework.

It shows a flow diagram with metadata of experiments as starting point, leading to a statistics-based retrieval and ranking. Evaluation is shown at the bottom, both statistical and with bioinformatics, to evaluate the performance of the proposed method.

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