Lmst

@tinyspheresof @rkward Sorry for the late response. Currently, there is no such functionality in #rkward, except that one in the screenshot.
But let me tell you about an upcoming feature called “Code navigation”. It is enabled in the latest AppImage (https://cdn.kde.org/ci-builds/education/rkward/master/linux/)
It helps you to very quickly navigate the R and #RMarkdown scripts. It will address your problem directly.

Screenshot of RKWard featuring the new Code Navigation tool highlighted in yellow in the top right corner. A red arrow points from the highlight to an example of RMarkdown syntax highlighting within the editor window. The interface includes various menus and panels, with the interface emphasised at the bottom right.

A first today: I changed the citation style in my #rstats #Rmarkdown doc, and it was easy and it worked! Thanks to Nicolas Tierney's "Rmarkdown for scientists" rmd4sci.njtierney.com/citing-artic... and github.com/citation-sty.... Save the csl code in a file in your R project and add a YAML line. 😎

13 Citing Articles & Bibliogra...

I'm trying out #Rkward on my new #KDEneon install. Is there any way in an #Rmarkdown script to highlight the code blocks/chunks in the script editor? They now have the same background as the rest of the script, and don't really stand out.

The three backticks / graves at the start and end of the code block do have a different background colour, but not the code in between.

@rkward
#rstats

Interactive resizing of picture and table content in Rmd and Quarto: https://r2resize.obi.obianom.com/index.html #rstats #quarto #rmarkdown

Как я за год написал шесть больших научных статей и несколько маленьких

Без «литературных негров» и чатГПТ — личный рассказ об инструментах, технологиях и приёмах, которые помогли мне не вылететь из аспирантуры и догнать коллег. Открытые данные, Python, R, RMarkdown, Quarto, git и немного ИИ в помощь исследователю.

https://habr.com/ru/articles/898038/

#научные_исследования #научная_работа #научные_статьи #открытые_данные #публикации #rmarkdown #deepl #rstudio #git #r_lang

Looking for tips on how to love #julialang Pluto.jl. So many people enjoy it and I just don't get it. Likely just me as I also dislike #Jupyter notebooks and prefer the "see all and be reproducible" style of #RMarkdown and #Quarto. Why F1 to see keyboard shortcuts. Why clunky Path/URL navigation?

3/ And this is an example #Rmarkdown document and the output

Template available here: https://github.com/Pakillo/grateful/blob/master/Rmd_Quarto/separate_bibliographies/grateful-Rmarkdown-separatebib.Rmd

$--- title: "Using 'grateful' with Rmarkdown: separate software bibliography" output: pdf_document: pandoc_args: ['--lua-filter=multibib.lua'] bibliography: main: main-refs.bib software: grateful-refs.bib citeproc: false --- ```{r echo=FALSE} # Download pandoc filter if not available # https://github.com/pandoc-ext/multibib if (!file.exists("multibib.lua")) { download.file(url = "https://raw.githubusercontent.com/pandoc-ext/multibib/main/_extensions/multibib/multibib.lua", destfile = "multibib.lua", mode = "wb") } ``` Here we cite a paper [@smith_software_2016]. Now we cite R packages: ```{r} library("ggplot2") library("visreg") ``` ```{r echo=FALSE} grateful::cite_packages(output = "paragraph", pkgs = "Session", out.dir = ".") ``` # References ::: {#refs-main} ::: # Software ::: {#refs-software} :::$

Writing manuscripts in #Quarto or #Rmarkdown?

Here's how to easily generate an appendix citing the #rstats packages used with {grateful}

https://pakillo.github.io/grateful

Interactive resizing of picture and table content in Rmd and Quarto: https://r2resize.obi.obianom.com/index.html #rstats #quarto #rmarkdown

For branded charts, check out {unhcrthemes}, shared yesterday! Together with {unhcrdown}, it forms a complete ecosystem for UNHCR data viz and reporting.

🔗 https://cran.r-project.org/web/packages/unhcrthemes/index.html

#rstats #rmarkdown #dataviz

@kupac I have all these same concerns about notebooks and more. I find #rmarkdown and #quarto much better than Jupyter, but they still suffer from similar problems.

Unless I am explicitly planning on compiling an HTML report, I tend to stay away from these literate programming tools.

I’m only just starting using #RMarkdown. Writing a #GIS lab has been enjoyable so far. If my life situation was different at graduation, I would have asked @paezha for a #postdoc. I think he uses it and #GitHub to collaborate with his students. There’s also all the cool urban #spatial #accessibility research he does.

Hey, #Rstats people: I'm always behind the curve on these things. Should I start using Quarto instead of #rmarkdown? Is #Quarto open, accessible, etc.? Is it locked into Rstudio's little world, or is it enshittification-resistant?

I'm searching on these topics as well, but if anyone has the straight dope, I'd love to hear it.

@brodriguesco
I commend you for pointing this out. I am no fool anymore. (Just made a report template using params yeeey \o/ )
#rstats #rmarkdown

@djnavarro

I hadn't heard of that, it sounds very interesting.

I'm a regular #RMarkdown user, and haven't found the time or motivation to jump to #Quarto. It looks like a combination of removing the rough spots of RMarkdown, but also expanding the features in a way that adds to my mental overhead.

We have a *really* hard time embracing the elegance of a truly minimal system for writing. At this point I'd love to have the absolute minimum set of features beyond basic markdown for academic writing. Maybe #litedown is that?