Pipeline release! nf-core/multiplesequencealign v1.1.1 - nf-core/multiplesequencealign v1.1.1 - Bogatell!
Please see the changelog: https://github.com/nf-core/multiplesequencealign/releases/tag/1.1.1
nf-core
A community effort to collect a curated set of analysis pipelines built using Nextflow
Pipeline release! nf-core/bamtofastq v2.2.0 - 2.2.0 - Kathleen Booth!
Please see the changelog: https://github.com/nf-core/bamtofastq/releases/tag/2.2.0
#bamtofastq #conversion #cramtofastq #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/ampliseq v2.14.0 - Ampliseq Version 2.14.0!
Please see the changelog: https://github.com/nf-core/ampliseq/releases/tag/2.14.0
#16s #18s #ampliconsequencing #edna #illumina #iontorrent #its #metabarcoding #metagenomics #microbiome #pacbio #qiime2 #rrna #taxonomicclassification #taxonomicprofiling #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/mhcquant v3.0.0 - MHCquant 3.0.0 - Monrepos!
Please see the changelog: https://github.com/nf-core/mhcquant/releases/tag/3.0.0
#dda #immunopeptidomics #massspectrometry #mhc #openms #peptides #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/mag v4.0.0 - mag 4.0.0 - Blue Huemul!
Please see the changelog: https://github.com/nf-core/mag/releases/tag/4.0.0
#annotation #assembly #binning #longreadsequencing #metagenomes #metagenomics #nanopore #nanoporesequencing #nfcore #openscience #nextflow #bioinformatics
nf-core boosted:
Pipeline release! nf-core/coproid v2.0.0 - DSL2 conversion!
Please see the changelog: https://github.com/nf-core/coproid/releases/tag/2.0.0
#adna #ancientdna #coprolite #microbiome #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/raredisease v2.5.0 - 2.5.0 - Fulliautomatix!
Please see the changelog: https://github.com/nf-core/raredisease/releases/tag/2.5.0
#diagnostics #raredisease #snv #structuralvariants #variantannotation #variantcalling #wes #wgs #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/coproid v2.0.0 - DSL2 conversion!
Please see the changelog: https://github.com/nf-core/coproid/releases/tag/2.0.0
#adna #ancientdna #coprolite #microbiome #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/proteinfamilies v1.1.1 - Lead Sparrow!
Please see the changelog: https://github.com/nf-core/proteinfamilies/releases/tag/1.1.1
#metagenomics #proteinfamilies #proteomics #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/pairgenomealign v2.1.0 - nf-core/pairgenomealign v2.1.0 – Goya champuru!
Please see the changelog: https://github.com/nf-core/pairgenomealign/releases/tag/2.1.0
#comparativegenomics #dotplot #genomics #last #pairwisealignment #synteny #wholegenomealignment #nfcore #openscience #nextflow #bioinformatics
🧑🏾💻 Need help with anything #nfcore #nextflow (#bioinformatics) pipelines, whether running or developing?
⏰ Today's EMEA friendly weekly helpdesk is at 10:00 CEST (Berlin time) on the nf-core gather.town! https://nf-co.re/join#gather-town
📅 Note that we also have other regular helpdesks for different TZs!
- 🌏 Asia-Pacific: Wednesdays @ 15:00 NZDT
- 🌎 Americas: Tuesdays @ 14:00 ET
Join the nf-core slack for more details and reminders!
Pipeline release! nf-core/proteinfamilies v1.1.0 - Nickel Elephant!
Please see the changelog: https://github.com/nf-core/proteinfamilies/releases/tag/1.1.0
#metagenomics #proteinfamilies #proteomics #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/epitopeprediction v3.0.0 - 3.0.0 - Wanne - 2025-05-09!
Please see the changelog: https://github.com/nf-core/epitopeprediction/releases/tag/3.0.0
#epitope #epitopeprediction #mhcbindingprediction #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/methylong v1.0.0 - 1.0.0 - Niveous Tiger!
Please see the changelog: https://github.com/nf-core/methylong/releases/tag/1.0.0
Pipeline release! nf-core/nascent v2.3.0 - Leto!
Please see the changelog: https://github.com/nf-core/nascent/releases/tag/2.3.0
#groseq #nascent #proseq #rna #transcription #tss #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/airrflow v4.3.0 - v4.3.0 - Revelio!
Please see the changelog: https://github.com/nf-core/airrflow/releases/tag/4.3.0
#airr #bcell #immcantation #immunorepertoire #repseq #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/demultiplex v1.6.1 - 1.6.1!
Please see the changelog: https://github.com/nf-core/demultiplex/releases/tag/1.6.1
#bases2fastq #bcl2fastq #demultiplexing #elementbiosciences #illumina #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/hlatyping v2.1.0 - 2.1.0 - Chewbacca!
Please see the changelog: https://github.com/nf-core/hlatyping/releases/tag/2.1.0
#dna #hla #hlatyping #immunology #optitype #personalizedmedicine #rna #nfcore #openscience #nextflow #bioinformatics
Pipeline release! nf-core/fastquorum v1.2.0 - 1.2.0!
Please see the changelog: https://github.com/nf-core/fastquorum/releases/tag/1.2.0
Client Info
Server: https://mastodon.social
Version: 2025.04
Repository: https://github.com/cyevgeniy/lmst