🔎 How can AI-powered tools help scientists uncover hidden connections in disease research?

🔗 Darling (v2.0): Mining disease-related databases for the detection of biomedical entity associations. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.06.025

📚 CSBJ: https://www.csbj.org/

#AIinScience #BiomedicalTextMining #Genomics #PrecisionMedicine #Bioinformatics #OpenScience #BiomedicalResearch #BiomedicalAI #LiteratureMining #SystemsBiology #Omics #KnowledgeDiscovery

I have started a new weekly newsletter that will be a bibliography of new research articles on the use of automated knowledge discovery in medicine. The bibliography is compiled by a machine learning program developed by Thomas Kirchel, to which I provide manual abstract relevance feedback. You can subscribe to it free by signing up for the newsletter "bims-aukdim Automated knowledge discovery techniques in medicine" at:

https://biomed.news/reports

#research #medicine #knowledgeDiscovery

What We Knew Without Knowing

https://www.newyorker.com/magazine/2025/04/07/what-we-knew-without-knowing

#HackerNews #WhatWeKnew #WithoutKnowing #NewYorker #ArticleInsights #KnowledgeDiscovery

Revolutionizing #KnowledgeDiscovery with #GenAI to Transform #DocumentManagement | by Roddam Harshavardhan Reddy | #Intuit Engineering | Mar, 2025 | Medium
https://medium.com/intuit-engineering/revolutionizing-knowledge-discovery-with-genai-to-transform-document-management-0cdf4385c11c

Speaking in the context of LLMs. Knowledge and intelligence is much more than memorization. So, I guess it should be acceptable if LLMs get some facts incorrect?

#LLMs #deeplearning #knowledgediscovery

Proceedings of #ECMLPKDD 2023 are out and freely accessible for a month https://2023.ecmlpkdd.org/program/proceedings/#MachineLearning #DataScience #knowledgegraph #knowledgediscovery

"Accelerating science with human-aware artificial intelligence"

Very interesting paper on augmenting human intelligence with AI for knowledge discovery.
Full text of paper:
https://arxiv.org/ftp/arxiv/papers/2306/2306.01495.pdf

The ELI5 explantion of paper in the popular press: https://techxplore.com/news/2023-07-human-aware-ai-scientific-discoveries.html

#AI #knowledgeDiscovery #randomWalks #hypergraphRandomWalks

#AI is killing the #OldWeb, and the #NewWeb struggles to be born. #GenerativeAI #models are changing the #economy of the web, making it cheaper to generate #lower #quality #content. We’re just beginning to see the effects of these changes. https://www.theverge.com/2023/6/26/23773914/ai-large-language-models-data-scraping-generation-remaking-web #KM #research #KnowledgeDiscovery #knowledgeManagement #education #FakeNews

Two #professorlife announcements:

1. Starting July 1, I'll be an Associate Professor with tenure!

2. I received the NSF CAREER award to work on Statistically-sound #knowledgediscovery from data (https://www.nsf.gov/awardsearch/showAward?AWD_ID=2238693&HistoricalAwards=false)!

#datamining #datascience #datamammoths #nsfcareer

The submission site for the #phdforum at ECMLPKDD is now open. Deadline: June 19. See info at https://2023.ecmlpkdd.org/submissions/phd-forum/ . #ECMLPKDD2023 #machinelearning #datamining #knowledgediscovery #datascience

The Data * Mammoths, my group of amazing undergraduate researchers, published another paper: ROhAN: Row-order Agnostic Null Models for Statistically-sound Knowledge Discovery, to appear in Data Mining and Knowledge Discovery, special issue for ECML-PKDD'23. See you in Turin! https://rionda.to/papers/AbuissaEtAl-ROhAN-DMKD23.pdf #statisticallysound #datascience #knowledgediscovery #datamining #professorlife #ECMLPKDD2023

Today I'll be talking about #statistically-sound #knowledgediscovery at #SIAMSDM2023, in the #blueskyidea track. It should be an interesting followup to Wei Ding's keynote on AI-enabled #scientificrevolution . #professorlife #datascience #datamining

National Library of Israel > How to Move Four Million Books
Land of Israel. How did the National Library of Israel move its collections—not once, but twice—from one location to another? These photos captured the transfer of hundreds of thousands and then millions of books to the various homes of the National Library over the years. https://blog.nli.org.il/en/moving-four-million-books/ #Israel #libraries #education #KnowledgeDiscovery #NationalLibrary

https://www.nytimes.com/2023/03/08/opinion/noam-chomsky-chatgpt-ai.html "In short, #ChatGPT and its brethren are constitutionally unable to balance creativity with constraint. They either #overgenerate (producing both truths & falsehoods, endorsing #ethical & #unethical #decisions alike) or undergenerate (exhibiting noncommitment 2 any decisions & indifference 2 consequences). Given #amorality, #Faux #science #linguistic incompetence of these systems, we can only laugh or cry at their popularity." #KM #KnowledgeManagement #KnowledgeDiscovery

Happy that my #bluesky idea "Statistically-sound #knowledgediscovery from data" was accepted to the blue sky track at #SIAMSDM23.#datascience #datamining #professorlife

If you're a #PhD student 🎓 in #datascience, #machinelearning, #datamining, #knowledgediscovery, #networkscience, and would like a fresh pair of eyes 👀 to look at your work, go no further than the #ECMLPKDD2023 PhD Forum!

📅 Deadline June 12, 2023
🔗 https://2023.ecmlpkdd.org/submissions/phd-forum

🪑Yllka Velaj & @matteo

#phdstudent #professorlife

#HelloWorld, time to do my #introduction 👋

I’m a #computerScientist working as research fellow in #computationalMedicine and doing a lot of #bioinformatics and #geneticEpidemiology.

I develop and apply statistical and computational methods to identify #multiomics modifications influencing complex human phenotypes. I’ve also worked on the problem of #knowledgeDiscovery in biological data, and on the reverse engineering of #geneRegulatoryNetworks.