#Phylogeny

@manisha @ansuz

Whales are fish, right?

#phylogeny #pickingfightswithscientists

2025-06-11

Sketch, capture and layout phylogenies

"We present new algorithms for visualizing rooted phylogenetic networks as either combining or transfer networks, in both cladogram and phylogram style. In addition, we introduce a layout algorithm that aims to improve clarity by minimizing the total stretch of reticulate edges."

github.com/husonlab/phylosketc

#phylogeny

J of Systematics and EvolutionJSE@mstdn.science
2025-06-04

You know what really *bugs* me?
doi.org/10.1111/jse.13182
Now you know!

🪲
🪲

(in a good way, of course! )

🪲

Read this #paper for free in #JSE!
@WileyEcolEvol
#systematics #evolution #Cretaceous #fossil #beetle #phylogenomics #Scirtidae #phylogeny

Image of a new scirtine fossil, Serracyphon philipsi gen. et sp. nov. and a revised phylogenomic analysis and Cretaceous fossil evidence, revealing new insights into the evolution of Scirtinae (Coleoptera: Scirtidae)
J of Systematics and EvolutionJSE@mstdn.science
2025-05-16

Peterson et al. investigate the #phylogeny, #biogeography, #reticulation, and #classification of Agrostis in their latest study published in #JSE!
Explore their #phylogeny right here!👇
doi.org/10.1111/jse.13175
@WileyEcolEvol
#PlantSci #systematics #evolution #ecology #grasses #botany

Parsimony chloroplast haplotype network for Agrostis (A) species and relatives (Cal = Calamagrostis, Ch = Chaetotropis, La = Lachnagrostis, P = Podagrostis, Poly = Polypogon, Tripl = Triplachne) inferred from rpl32-trnL sequence data. Each link between haplotypes represents one mutational difference. The geographic distribution of haplotypes is as follows: red = North America, orange = South America, light green = Africa, dark green = Asia, blue = Europe, purple = Australia, and pink = East Asia.
J of Systematics and EvolutionJSE@mstdn.science
2025-04-24

Who doesn't love a good sequel?!
Soreng et al. continue their work on #grass #phylogeny with, "A worldwide #phylogenetic classification of the #Poaceae (Gramineae) III: An update."
Get in here!👇🔓
doi.org/10.1111/jse.12847
@WileyEcolEvol
#PlantSci #systematics #photosynthesis #botany #evolution

A worldwide phylogenetic classification of the Poaceae. The indigenous range of each species is presented in different colors.

@cenobyte

Well, you're also h. sapiens, rather than myxogastria. Better looking goes with the territory 😉

#taxonomy #phylogeny #myxogastria #slime #mold #SlimeMold

J of Systematics and EvolutionJSE@mstdn.science
2025-04-07

The #phylogeny and #biogeographic history of the Ulmaceae have long been poorly understood.
In this study, Zhang et al. reconstruct #phylogenetic relationships within the family and infer spatio-temporal #diversification patterns. jse.ac.cn/EN/10.1111/jse.12720
@WileyEcolEvol
#PlantSci #botany

Reconstruction of phylogenetic relationships and inferred spatio-temporal diversification patterns based on chloroplast genome (complete cpDNA) and nuclear ribosomal DNA sequences (nrDNA) within the Ulmaceae family.

We published a paper. We used phylodynamics to analyze over 2000 isolates from the meningococcal B epidemic that New Zealand experienced from 1991 to 2008. We found the epidemic strain maybe circulating a decade before disease was detected and suggest that increasing inequalities in New Zealand during late 1980s/early 1990s may have contributed to the start of the epidemic in. the pubmed.ncbi.nlm.nih.gov/399240 #phylogeny #infectiousdiseases #publichealth

Giancarlo Dessìgian_d_gian@mastodon.uno
2025-03-03

Immagino che il prossimo passo di #Trump sarà bandire tutte le pubblicazioni scientifiche che riportano i termini #phylogeny #phylogenetic #evolution e #evolutionary
E magari dare foco a tutte le scuole intitolate a quell'eretico di Charles Darwin

2025-02-12

Darwins heritage
Arfleið Darwins
Published 2010

Edited Volume we contributed to, á chapter on human evolution

Published by the icelandic literary society
#darwinday #darwin #evolution #iceland #phylogeny #diversity #life

2025-01-30

New paper in American Journal of Botany using @gbif mediated data:

Fire in the tree: The origin and distribution of fire–adapted traits within #conifers and their influence on speciation rates across the conifer #phylogeny

#CiteTheDOI: ❌

doi.org/10.1002/ajb2.16454

2025-01-28

I wish I could get a large enough print of this that I could actually read it. It's a phylogeny of flowering plants along with examples of typical flowers from each genus. Mind blown. #NativePlants #Phylogeny

Black background, a huge grid of colorful flowers lined up in rows, and tiny lines and words showing how everything is related.
neville parknev@flipping.rocks
2025-01-20

Uhhhhh holy shit no one told me _Dolomedes_ & co. got moved from Pisauridae to their own family, Dolomedidae? wsc.nmbe.ch/family/158/Dolomed

Morris, Hazzi & Hormiga 2025: doi.org/10.1016/j.ympev.2024.1 :ClosedAccess:

If you have a WSC account you can get the PDF here: wsc.nmbe.ch/reference/18059

#Arachnews #phylogeny #taxonomy #arachnology #arachnids #spiders

cassandroid אַנטיפֿאַcassandroid.substack.com@bsky.brid.gy
2025-01-20

Marveling about this beautiful #wasp #phylogeny visualization from the great book "Wasps" by Eric R. Eaton. I'd so love to have that (with timeline approximations) for EVERY taxon.

2025-01-03

La phylogénie moléculaire, en plus de révéler les relations évolutives entre espèces, souches, etc..., est un formidable outil pour comprendre les dynamiques d'adaptations des pathogènes

#Science #Evolution #Biology #Phylogeny

nature.com/articles/s41586-024

2024-12-26

ape = apina monkey =apina turtle = kilpikonna tortoise = kilpikonna moth = perhonen butterfly = perhonen pigeon = kyyhky dove = kyyhky Well, apes are monkeys, tortoises are turtles, butterflies are moths, and doves are pigeons; Finnish is taxonomically correct language 🙃 #phylogeny

SICB journals(ICB & IOB)SICBJOURNALS@earthstream.social
2024-12-11

Now in IOB issue !

Variation in Molar Size and Proportions in the #hominid Lineage: An Inter- and Intraspecific Approach
L A D'Addona et al

doi.org/10.1093/iob/obae041

#evolution #biology #fossils #Phylogeny #allometric #science

2024-12-09

@dantheclamman Naked (kind-of) shell-less clams with an agile foot read like a proto-cephalopod. Are they close at all to the phylogenetic branch that took off with squids, octopus and cuttlefish, or is "cephalopodness" a trait that can re-evolve from an ancestral clam base?
#evolution #phylogeny #cephalopods

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